We have investigated microbial mats of alkaline siliceous hot springs in Yellowstone National Park as natural model communities to learn how microbial populations group into species-like fundamental units. Here, we bring together empirical patterns of the distribution of molecular variation in predominant mat cyanobacterial populations, theory-based modelling of how to demarcate phylogenetic cl...

The fatty-acyl composition of the seed oil was determined for 100 ecotypes of Arabidopsis thaliana. Despite coming from diverse geographical locations, seed fatty-acyl profiles of all ecotypes were remarkably similar. They contained identical fatty acids, including the characteristic C20 and C22 very-long-chain fatty acids (VLCFAs). The total proportions of seed VLCFA varied between 22% and 35%...

The aim of this study was to investigate the chemical composition three maca (Lepidium meyenii Walp.) ecotypes (yellow, black, and red) their in vitro fermentation characteristics antioxidant effects on cow rumen liquor. were added a total mixed ratio (TMR) different doses (0, 150, 300 mg/g) incubated under anaerobic conditions for 120 h. Methane production recorded after 24 h incubation. Antio...

We have investigated microbial mats of alkaline siliceous hot springs in Yellowstone National Park as natural model communities to learn how microbial populations group into species-like fundamental units. Here, we bring together empirical patterns of the distribution of molecular variation in predominant mat cyanobacterial populations, theory-based modelling of how to demarcate phylogenetic cl...

Identification of closely related, ecologically distinct populations of bacteria would benefit microbiologists working in many fields including systematics, epidemiology and biotechnology. Several laboratories have recently developed algorithms aimed at demarcating such 'ecotypes'. We examine the ability of four of these algorithms to correctly identify ecotypes from sequence data. We tested th...

Glucosinolate profiles differ among Arabidopsis thaliana ecotypes, caused by the composition of alleles at several glucosinolate biosynthetic loci. One of these, GS-Elong, harbors a family of methylthioalkylmalate synthase (MAM) genes that determine the side chain length of aliphatic glucosinolate structures. Fine mapping reveals that GS-Elong constitutes an insect resistance quantitative trait...

In species with high gene flow and consequent low interpopulation differentiation over wide geographic ranges, differential gene expression along ecological gradients often reveals adaptive significance. We investigated potential differences in protein expression between Picea abies ecotypes adapted to contrasting altitude conditions. Protein expression patterns were compared between needles an...

Adaptation to latitudinal patterns of environmental variation is predicted to result in clinal variation in leaf traits. Therefore, this study tested for geographic differentiation and plastic responses to vernalization in leaf angle and leaf morphology in Arabidopsis thaliana. Twenty-one European ecotypes were grown in a common growth chamber environment. Replicates of each ecotype were expose...

We report AtPRIMER, an application that automates the discovery of new polymorphic markers between ecotypes of Arabidopsis thaliana. On specifying two ecotypes and the genomic region of interest, the script retrieves all corresponding single nucleotide polymorphisms (SNPs) and generates CAPS and/or dCAPS PCR primer sequences. We show that AtPRIMER accurately found specific polymorphic markers f...

in order to the study of the salinity effects on seed germination and effecting parameter of fennel (foeniculum vulgare) was conducted a factorial experiment in a completely randomized design with two factors and three replications. factor a was 10 ecotypes, including; sardasht, saghghez, kerman, tabriz,sabzevar, rome, khusf, bojnoord, mashhad and shabestar and factor b was five concentrations ...