Spatial and spatio-temporal models with R-INLA.

نویسندگان

  • Marta Blangiardo
  • Michela Cameletti
  • Gianluca Baio
  • Håvard Rue
چکیده

During the last three decades, Bayesian methods have developed greatly in the field of epidemiology. Their main challenge focusses around computation, but the advent of Markov Chain Monte Carlo methods (MCMC) and in particular of the WinBUGS software has opened the doors of Bayesian modelling to the wide research community. However model complexity and database dimension still remain a constraint. Recently the use of Gaussian random fields has become increasingly popular in epidemiology as very often epidemiological data are characterised by a spatial and/or temporal structure which needs to be taken into account in the inferential process. The Integrated Nested Laplace Approximation (INLA) approach has been developed as a computationally efficient alternative to MCMC and the availability of an R package (R-INLA) allows researchers to easily apply this method. In this paper we review the INLA approach and present some applications on spatial and spatio-temporal data.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Bayesian Spatial Modelling with R-INLA

The principles behind the interface to continuous domain spatial models in the RINLA software package for R are described. The Integrated Nested Laplace Approximation (INLA) approach proposed by Rue, Martino, and Chopin (2009) is a computationally effective alternative to MCMC for Bayesian inference. INLA is designed for latent Gaussian models, a very wide and flexible class of models ranging f...

متن کامل

Fitting dynamic models using integrated nested Laplace approximations - INLA

In this paper we propose a computational framework to perform approximate Bayesian inference in linear and generalized linear dynamic models based on the Integrated Nested Laplace Approximation (INLA) approach, which overcomes some limitations of computational tools presently available in the dynamic modeling literature. We show how to formulate specific latent models in a state-space form, eve...

متن کامل

Space-time interpolation of daily air temperatures

We propose a model to describe the mean function as well as the spatio-temporal covariance structure of 15 years of both maximum and minimum daily temperature data from 190 stations throughout the region of Catalonia (Spain), with daily data covering the period 1994-2008. Our aim is threefold: (a) estimation of the long-term trend of maximum and minimum temperatures; (b) assessing the spatial a...

متن کامل

An Accessible Method for Implementing Hierarchical Models with Spatio-Temporal Abundance Data

A common goal in ecology and wildlife management is to determine the causes of variation in population dynamics over long periods of time and across large spatial scales. Many assumptions must nevertheless be overcome to make appropriate inference about spatio-temporal variation in population dynamics, such as autocorrelation among data points, excess zeros, and observation error in count data....

متن کامل

SpatialEpiApp: A Shiny web application for the analysis of spatial and spatio-temporal disease data.

During last years, public health surveillance has been facilitated by the existence of several packages implementing statistical methods for the analysis of spatial and spatio-temporal disease data. However, these methods are still inaccesible for many researchers lacking the adequate programming skills to effectively use the required software. In this paper we present SpatialEpiApp, a Shiny we...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Spatial and spatio-temporal epidemiology

دوره 7  شماره 

صفحات  -

تاریخ انتشار 2013