Fluxome analysis using GC-MS
نویسنده
چکیده
Fluxome analysis aims at the quantitative analysis of in vivo carbon fluxes in metabolic networks, i. e. intracellular activities of enzymes and pathways. It allows investigating the effects of genetic or environmental modifications and thus precisely provides a global perspective on the integrated genetic and metabolic regulation within the intact metabolic network. The experimental and computational approaches developed in this area have revealed fascinating insights into metabolic properties of various biological systems. Most of the comprehensive approaches for metabolic flux studies today involve isotopic tracer studies and GC-MS for measurement of the labeling pattern of metabolites. Initially developed and applied mainly in the field of biomedicine these GC-MS based metabolic flux approaches have been substantially extended and optimized during recent years and today display a key technology in metabolic physiology and biotechnology.
منابع مشابه
The Shewanella oneidensis MR - 1 fluxome under various oxygen conditions
The Shewanella oneidensis MR-1 fluxome under various oxygen conditions Abstract 1 The central metabolic fluxes of Shewanella oneidensis MR-1 were examined under 2 carbon-limited (aerobic) and oxygen-limited (micro-aerobic) chemostat conditions using 13 C 3 labeled lactate as the sole carbon source. The carbon labeling patterns of key amino acids in 4 biomass were probed using both GC-MS and 13 ...
متن کاملReplacing Multiple 50-Minute GC and GC-MS/SIM Analyses with One 15-Minute Full-Scan GC-MS Analysis for Nontargeted Pesticides Screening and >10x Productivity Gain Application
Pesticide analysis of fruits and vegetables requires finding trace-level residues in complex matrices. Up to now, the typical trade-off is between sensitivity and confirmation. Therefore, multiple injections are needed for screening and confirmation using gas chromatography with mass spectrometry (GC-MS) or GC-MS in combination with GC with element-selective detection. With the recent introduct...
متن کاملGC-MS analysis of methanol extracts of Vernonia cinerea
In this study, the bioactive compounds of Vernonia cinerea have been evaluvated using GC-MS. The chemical compositions of the whole plant methanol extract of Vernonia cinerea were investigated using Perkin-Elmer Gas Chromatography Mass Spectroscopy. GC-MS analysis of V. cinerea plant methanol extract revealed the existence of the GC-MS chromatogram of the seven peaks presented .The major compou...
متن کاملApplication of Stable Isotope-Assisted Metabolomics for Cell Metabolism Studies
The applications of stable isotopes in metabolomics have facilitated the study of cell metabolisms. Stable isotope-assisted metabolomics requires: (1) properly designed tracer experiments; (2) stringent sampling and quenching protocols to minimize isotopic alternations; (3) efficient metabolite separations; (4) high resolution mass spectrometry to resolve overlapping peaks and background noises...
متن کاملAnalysis of 136 pesticides in avocado using a modified QuEChERS method with LC-MS/MS and GC-MS/MS.
A simple and high-throughput screening method for the analysis of 136 pesticides in avocado ( Persea americana ) by LC-(+)-ESI-MS/MS and GC-MS/MS is presented. A modified QuEChERS sample preparation method was developed to improve the extraction recovery of highly lipophilic pesticides. Extracts from minced avocados after acetonitrile (MeCN) extraction were directly injected to LC-MS/MS, wherea...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- Microbial Cell Factories
دوره 6 شماره
صفحات -
تاریخ انتشار 2007