Computational 'microscopy' of cellular membranes.
نویسندگان
چکیده
Computational 'microscopy' refers to the use of computational resources to simulate the dynamics of a molecular system. Tuned to cell membranes, this computational 'microscopy' technique is able to capture the interplay between lipids and proteins at a spatio-temporal resolution that is unmatched by other methods. Recent advances allow us to zoom out from individual atoms and molecules to supramolecular complexes and subcellular compartments that contain tens of millions of particles, and to capture the complexity of the crowded environment of real cell membranes. This Commentary gives an overview of the main concepts of computational 'microscopy' and describes the state-of-the-art methods used to model cell membrane processes. We illustrate the power of computational modelling approaches by providing a few in-depth examples of large-scale simulations that move up from molecular descriptions into the subcellular arena. We end with an outlook towards modelling a complete cell in silico.
منابع مشابه
Nanofibrillated chitosan/polycaprolactone bionanocomposite scaffold with improved tensile strength and cellular behavior
Objective(s): Fabrication of scaffolds with improved mechanical properties and favorable cellular compatibility is crucial for many tissue engineering applications. This study was aimed to improve mechanical and biological properties of polycaprolactone (PCL), which is a common biocompatible and biodegradable synthetic polymer in tissue engineering. Nanofibrillated chitosan (NC) was used as a n...
متن کاملMembrane Sculpting by F-BAR Domains Studied by Molecular Dynamics Simulations
Interplay between cellular membranes and their peripheral proteins drives many processes in eukaryotic cells. Proteins of the Bin/Amphiphysin/Rvs (BAR) domain family, in particular, play a role in cellular morphogenesis, for example curving planar membranes into tubular membranes. However, it is still unclear how F-BAR domain proteins act on membranes. Electron microscopy revealed that, in vitr...
متن کاملPolyester/SiO2 Nanocomposites: Gas Permeation, Mechanical, Thermal and Morphological Study of Membranes
Using of nanocomposite membranes composed of polymer and inorganic nanoparticles is a novel method to enhance gas separation performance. In this study, membranes were fabricated from polyester (PE) containing silica (SiO2) nanoparticles and gas permeation properties of the resulting membranes were investigated. Morphology of the membranes, SiO2 distribution a...
متن کاملA Thin Layer Imaging with the Total Internal Reflection Fluorescence Microscopy
Total internal reflection fluorescence microscopy (TIRFM) is an optical technique that allows imaging of a thin layer of the sample with a thickness of about 100-200 nm. It is used in science of cell biology to study cellular processes, especially near the membranes of living cells. This method is based on the total internal reflection phenomenon, where the evanescent wave is generated in the l...
متن کاملPreparation and characterization of nano-porous Polyacrylonitrile (PAN) membranes with hydrophilic surface
Polyacrylonitrile (PAN) membranes with nano-porous surface and high hydrophilicity were fabricated by addition of polyoxyethylene (40) nonylphenyl ether (IGEPAL) as an additive in the casting solution. The membranes were prepared from PAN/IGEPAL/1-Methyl-2-pyrrolidone (NMP) via phase inversion induced by immersion precipitation technique. Pure water was used as coagulation medium. The effects o...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Journal of cell science
دوره 129 2 شماره
صفحات -
تاریخ انتشار 2016